BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D09LP1|AL427896
(1045 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1219 2000 0.0
>3x_Contig1219
Length = 5018
Score = 2000 bits (1005), Expect = 0.0
Identities = 1026/1034 (99%), Gaps = 2/1034 (0%)
Strand = Plus / Minus
Query: 1 gggtaaatctttcggtactgttggtggttacgttgctggttctttgcagctaattgactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2403 gggtaaatctttcggtactgttggtggttacgttgctggttctttgcagctaattgactg 2344
Query: 61 ggtgagatcttatgctcctggtttcatcttcaccactactttaccacctgctgtcatggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2343 ggtgagatcttatgctcctggtttcatcttcaccactactttaccacctgctgtcatggc 2284
Query: 121 aggtgctgctgaggctatcagataccaacgttctcatttggacttgagacaagaccaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2283 aggtgctgctgaggctatcagataccaacgttctcatttggacttgagacaagaccaaca 2224
Query: 181 aagacatacaacctatgttaaagacggtttagctgatttgggtattccagtgatgccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2223 aagacatacaacctatgttaaagacggtttagctgatttgggtattccagtgatgccaaa 2164
Query: 241 cccatctcatattgttccagttttggttggtaaccctcacttggccaaacaagcatctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2163 cccatctcatattgttccagttttggttggtaaccctcacttggccaaacaagcatctga 2104
Query: 301 tatcttgatggacaagcatcgtatttacgtccaagccatcaacttcccaactgtcgctag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2103 tatcttgatggacaagcatcgtatttacgtccaagccatcaacttcccaactgtcgctag 2044
Query: 361 aggtaccgaaaggttgagaattaccccaactccgggccacactaacgatctatctgacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2043 aggtaccgaaaggttgagaattaccccaactccgggccacactaacgatctatctgacat 1984
Query: 421 cttaatggatgctttggaagatgtctggtccactctacaattaccaagggtacgtgactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1983 cttaatggatgctttggaagatgtctggtccactctacaattaccaagggtacgtgactg 1924
Query: 481 ggaagcccaaggcggtttgttgggtgttggtgatccaaaccacgttccccaaccaaactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 ggaagcccaaggcggtttgttgggtgttggtgatccaaaccacgttccccaaccaaactt 1864
Query: 541 atggacgaaggatcaactgactttgaccaataatgatttgcatccaaatgttaaacagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 atggacgaaggatcaactgactttgaccaataatgatttgcatccaaatgttaaacagcc 1804
Query: 601 aatcatcgaacaattagaagtctcttctggtattagatactagtcgaacttgcttagacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 aatcatcgaacaattagaagtctcttctggtattagatactagtcgaacttgcttagacg 1744
Query: 661 acacatactttgaaccgtctattcggaggtacaattttgatctttttacawhycccaccc 720
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1743 acacatactttgaaccgtctattcggaggtacaattttgatctttttacaacccccaccc 1684
Query: 721 ccmncccctcccccctttggagaragaatactgatactattatattattattcctatttt 780
|| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1683 ccaccccctcccccctttggagaaagaatactgatactattatattattattcctatttt 1624
Query: 781 ttttcatgattatgaacaatcatgactattatattctaattgtttactttctttctaaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 ttttcatgattatgaacaatcatgactattatattctaattgtttactttctttctaaga 1564
Query: 841 ggcttaacagaaacgaaagatcgccatctacaaggaatcaataaaagaaaaaaatatgaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 ggcttaacagaaacgaaagatcgccatctacaaggaatcaataaaagaaaaaaatatgaa 1504
Query: 901 aaaaaagttgtcacatttaatgatttattctacaaaatattcataaggtactctgttcaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 aaaaaagttgtcacatttaatgatttattctacaaaatattcataaggtactctgttcaa 1444
Query: 961 ctctgctattgcttattt-ccactcgaaagtaa-catccttactcccattgtaaaaaagt 1018
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1443 ctctgctattgcttatttcccactcgaaagtaaccatccttactcccattgtaaaaaagt 1384
Query: 1019 gtttgatgattttt 1032
||||||||||||||
Sbjct: 1383 gtttgatgattttt 1370
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8935
Number of Sequences: 1807
Number of extensions: 8935
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 1045
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1029
effective length of database: 10,329,639
effective search space: 10629198531
effective search space used: 10629198531
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)